学術論文 & 書籍等出版物
2025
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Honda S*, Yokoyama A and Suzuki N
RNA editing of genomic neighbors controls antiviral response in fungi
Cell Host & Microbe 33(4) 545-559 (2025) DOI: 10.1016/j.chom.2025.02.016.
*Corresponding author
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福井大学でのプレスリリースはこちら
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本田信治, 鈴木信弘
ゲノム近傍のRNA編集酵素・転写因子モジュールによる真菌の抗ウイルス応答の制御
実験医学 2025年9月号 Vol.43 No.14 (2025) DOI:10.18958/7783-00003-0006126-00
2023
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Honda S*, Yokoyama A and Suzuki N
RNA Editing of Genomic Neighbors Controls Antiviral Response in Fungi
Sneak Peek (2023) DOI: 10.2139/ssrn.4425943
*Corresponding author
2020
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Courtney AJ, Kamei M, Ferraro AR, Gai K, He Q, Honda S and Lewis ZA
Normal Patterns of Histone H3K27 Methylation Require the Histone Variant H2A.Z in Neurospora crassa
Genetics 216(1) 51-66 (2020) DOI: 10.1534/genetics.120.303442
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Storck WK, Bicocca VT, Rountree MR, Honda S, Ormsby T and Selker EU
LSD1 prevents aberrant heterochromatin formation in Neurospora crassa
Nucleic acids research 48(18) 10199-10210 (2020) DOI: 10.1093/nar/gkaa724
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Honda S, Eusebio-Cope A, Miyashita S, Yokoyama A, Aulia A, Shahi S, Kondo H and Suzuki N
Establishment of Neurospora crassa as a model organism for fungal virology
Nature communications 11(1) 5627-5627 (2020) DOI: 10. 1038/s41467-020-19355-y
2019
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Klocko AD, Uesaka M, Ormsby T, Rountree MR, Wiles ET, Adhvaryu KK, Honda S and Selker EU
Nucleosome Positioning by an Evolutionarily Conserved Chromatin Remodeler Prevents Aberrant DNA Methylation in Neurospora
Genetics 211(2) 563-578 (2019) DOI: 10.1534/genetics.118.301711
2018
- Jamieson K, McNaught KJ, Ormsby T, Leggett NA, Honda S and Selker EU
Telomere repeats induce domains of H3K27 methylation in Neurospora
Elife e31216 (2018) DOI: 10.7554/eLife.31216
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Bicocca VT, Ormsby T, Adhvaryu KK, Honda S, Selker EU
Telomere repeats induce domains of H3K27 methylation in Neurospora
Elife e41497 (2018) DOI: 10.7554/eLife.41497.
2016
- Klocko AD, Ormsby T, Galazka JM, Leggett N, Uesaka M, Honda S, Freitag M and Selker EU
Normal chromosome conformation depends on subtelomeric facultative heterochromatin in Neurospora crassa
Proceedings of the National Academy of Sciences 113(52):15048-15053 (2016) DOI: 10.1073/pnas.1615546113
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Honda S, Bicocca VT, Gessaman JD, Rountree MR, Yokoyama A, Yu EY, Selker JM and Selker EU
Dual chromatin recognition by the histone deacetylase complex HCHC is required for proper DNA methylation in Neurospora crassa
Proceedings of the National Academy of Sciences 113(41), E6135–E6144 DOI: 10.1073/pnas.1621475114
- Galazka JM, Klocko AD, Uesaka M, Honda S, Selker EU and Freitag M
Neurospora chromosomes are organized by blocks of importin alpha-dependent heterochromatin that are largely independent of H3K9me3
Genome Research 26(8):1069-80 (2016) DOI: 10.1101/gr.203182.115
2015
- Adhvaryu KK, Gessaman JD, Honda S, Lewis ZA, Grisafi PL and Selker EU
The Cullin-4 complex DCDC does not require key E3 ubiquitin ligase elements to control heterochromatin in Neurospora
Eukaryotic Cell 14: 25-8 (2015) DOI: 10.1128/EC.00212-14
2013
- Qi X, Li Y, Honda S, Hoffmann S, Marz M, Mosig A, Podlevsky JD, Stadler PF, Selker EU and Chen JJ
The common ancestral core of vertebrate and fungal telomerease RNAs
Nucleic Acids Research 41: 450-62 (2013) DOI: 10.1093/nar/gks980
2012
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Honda S, Lewis ZA, Shimada K, Fischle W, Sack R and Selker EU
Heterochromatin Protein 1 forms distinct complexes to direct histone deacetylation and DNA methylation
Nature Structural & Molecular Biology 19: 471-7 (2012) DOI: 10.1038/nsmb.2274
2010
- Lewis ZA, Adhvaryu KK, Honda S, Shiver AL, Knip M, Sack R and Selker EU
DNA methylation and normal chromosome behavior in Neurospora depend on five components of a histone methyltransferasecomplex, DCDC
PLoS Genetics 6(11): e1001196 (2010) DOI: 10.1371/journal.pgen.1001196
- Lewis ZA, Adhvaryu KK, Honda S, Shiver AL and Selker EU
Identification of DIM-7, a protein required to target the DIM-5 H3 methyltransferase to chromatin
Proceedings of the National Academy of Sciences 107: 8310-5 (2010) DOI: 10.1073/pnas.1000328107
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Honda S, Lewis ZA, Huarte M, Cho LY, David LL, Shi Y and Selker EU
The DMM complex prevents spreading of DNA methylation from transposons to nearby genes in Neurospora crassa
Genes and Development 24: 443-54 (2010) DOI: 10.1101/gad.1893210
2009
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Honda S and Selker EU
Tools for fungal proteomics: Multifunctional Neurospora vectors for gene replacement, protein expression and protein purification
Genetics 182: 11-21;23 (2009) DOI: 10.1534/genetics.108.098707
- Aihara T, Nakamura N, Honda S and Hirose S
A Novel Potential Role for Gametogenetin-Binding Protein1 (GGNBP1) in Mitochondrial Morphogenesis During Spermatogenesis of Mice
Biology of Reproduction 80: 762-70 (2009) DOI: 10.1095/biolreprod.108.074013
- Lewis ZA, Honda S, Khlafallah TK, Jeffress JK, Freitag M, Mohn F, Schubeler D and Selker EU
Relics of repeat-induced point mutation direct heterochromatin formation in Neurospora crassa
Genome Research 19: 427-37 (2009) DOI: 10.1101/gr.086231.108
2008
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Honda S and Selker EU
Direct interaction between DNA methyltransferase DIM-2 and HP1 is required for DNA methylation in Neurospora crassa
Molecular and Cellular Biology 28: 6044-55 (2008) DOI: 10.1128/MCB.00823-08
2006
- Nakamura N, Kimura Y, Tokuda M, Honda S and Hirose S
MARCH-V is a novel mitofusion 2- and Drp1-binding protein able to change mitochondrial morphology
EMBO reports 7: 1019-22 (2006) DOI: 10.1038/sj.embor.7400790
2005
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Honda S, Aihara T, Hontani M, Okubo K and Hirose S
Mutational analysis of action of mitochondrial fusionfactor mitofusin-2
Journal of Cell Science 118: 3153-61 (2005) DOI: 10.1242/jcs.02449
2004
- Mistry AC, Kato A, Tran YH, Honda S, Tsukada T, Takei Y and Hirose S
FHL5, a novel actin-binding protein, is highly expressed in eel gill pillar cells and responds to wall tension
American Journal of Physiology 311: 424-32 (2004) DOI: 10.1152/ajpregu.00108.2004
2003
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Honda S and Hirose S
Stage-specific enhanced expression of mitochondrial fusion and fission factors during spermatogenesis in rat testis
Biochemical and Biophysical Research Communications 287: R1141-54 (2003) DOI: 10.1016/j.bbrc.2003.10.008
2002
- Miyamoto K, Nakamura N, Kashiwagi M, Honda S, Kato A, Hasegawa S, Takei Y and Hirose S
RING finger, B-box, and coiled-coil (RBCC) protein expression in branchial epithelial cells of Japanese eel, Anguilla japonica
European Journal of Biochemistry 269: 6152-61 (2002) DOI: 10.1046/j.1432-1033.2002.03332.x
2001
- Ookata K, Tojo A, Onozato ML, Kashiwagi M, Honda S and Hirose S
Distribution of stanniocalcin 1 in rat kidney and its regulation by vitamin D3
Experimental Nephrology9: 428-35 (2001) DOI: 10.1159/000052642
- Mistry AC, Honda S and Hirose S
Structure, properties and enhanced expression of galactose-binding C-type lectins in mucous cells of gills from freshwaterJapaneseeels (Anguilla japonica)
Biochemical Journal 360: 107-15 (2001) DOI: 10.1042/0264-6021:3600107
- Mistry AC,Honda S, Hirata T, Kato A and Hirose S
Eel urea transporter is localized to chloride cells and is salinity dependent
American Journal of Physiology 281: R1594-604 (2001) DOI: 10.1152/ajpregu.2001.281.5.R1594
2000
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Honda S, Kashiwagi M, Miyamoto K, Takei Y and Hirose S
Multiplicity, structures, and endocrine and exocrine natures of eel fucose-binding lectins
Journal of Biological Chemistry 275: 33151-7 (2000) DOI: 10.1074/jbc.M002337200
1999
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Honda S, Kashiwagi M, Ookata K, Tojo A and Hirose S
Regulation by 1alpha,25-dihydroxyvitamin D3of expression of stanniocalcin messages in the rat kidney and ovary
FEBS Letters 459: 119-22 (1999) DOI: 10.1016/s0014-5793(99)01225-9